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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900803.1_cds_XP_016450831.1_45246
CDS Infomation

[gene=LOC107775594] [db_xref=GeneID:107775594] [protein=probable acyl-activating enzyme 17, peroxisomal isoform X3] [protein_id=XP_016450831.1] [location=join(34657..34877,35952..36156,37672..37712,37889..38014,38586..38659,39483..39703,40250..40344,40623..40839,41498..41623,41702..41800,41960..42172,42245..42355)] [gbkey=CDS]
Sequence

ATGAATATTTCATTTTCAGTTCCTCCTGAATGTATTTTACGTGAGAGTCCATCTCATCCA
GGTGGTCAGTGGCTTCCTGGAGCGCGAGTGAACCCAGCGAAGAATTGCCTCAGTTTTAGA
AAGAGGACTTTAAGTGATGTAGCCATAGTGTGGCGAAGTGAAGGAAATGACGAAGCACCT
GTTGAAAAAATGACCTTGAAGGAGTTATGTGAATCAGTTTGGGCAGTTGCATATGCTCTT
GAAACCCTGGGTTTGGAGAAAGGATCTGCCATAGCTATAGATATGCCGATGGATGTTAAT
TCTGTGGTGATCTACTTGGCTATTGTTCTTGCTGGTTATGTAGTTGTGTCAATTGCTGAT
AGTTTTGCTCCAAGTGAAATTTCGACAAGGCTCATCTTATCAAAAGCAAAAGCAATTTTT
ACGCAGGATTTTATTTTCCGTGGAGATAAAAAGATACCCTTGTACAGTCGAGTTGTTGAT
GCTCGTTCACCGACAGCAATTGTCATTCCCAATAGAGCCTCCAGCTTAAGCATACAATTA
CGTGATGGAGACATCTCTTGGCCTGACTTTTTAGAAAGAGTGAAAGATTCCAGGGGTCTC
GAGTTTGTTGCAGTAGAACAACCTATTACTGCATTTACAAACATTCTGTTCTCATCTGGC
ACCACAGGAGAGCCAAAGGCAATTCCATGGAGTCTCCTCTCACCTTTCAAGTCGGCTGCT
GACGGATGGTGCCATATGGATATAAAAAAAGGTGACGTGGTTGCTTGGCCCACTAATCTT
GGGTGGATGATGGGACCTTGGCTTGTTTATGCTTCACTATTGAATGGGGCGTCCATTGCC
TTGTATAATGGATCTCCCCTTGGTTCTGGCTTTGCTAAGTTTGTTCAGGACGCTAAAGTA
ACTATGCTCGGGGTGATCCCAAGTATAGTGAGGACTTGGAAAGCGAAGAATTCTCCTGAT
GGCTTTGATTGGTCGACCATCCGTTTCTTTGGCTCCACTGGTGAGGCATCGAGCGTGGAT
GAATATCTATGGCTGATGGGAAGAGCTGAATATAAACCAATAATTGAGTATTGCGGCGGT
ACAGAGATTGGTGGCTCCTTTGTTTCTGGGTCATTGTTGCAGCCCCAGTCTTTAGCCGCT
TTCAGCACAGCAGTCATGGGATGTAGTCTTCATATTCTTGGGGACGATGGTCTTCCTATA
CCATCAGATGTTCCTGGGACTGGTGAATTGGCCCTTGGTCCTCTCATGTTTGGAGCTTCA
AGCACATTACTGAATGCGGACCACAATGAGATCTACTTCAAAGGAATGCCTGTTTTGAAT
GGAAAGGTTCTAAGAAGGCACGGGGATGTGTTTGAACGTACTTCTAAAGGATATTACCAT
GCACATGGTCGTGCAGATGATACAATGAACTTAGGGGGTATAAAGGTGAGTTCACTTGAG
ATTGAGCGCATATGCAATGCAGCAGACGAAAATATACTAGAAACAGCAGCAGTTGGAGTA
CCACCTACTGGAGGTGGGCCTGAGAAGTTGGTAATTGCTGTCGTATTCAAGGATTCAGAT
AACTTGGAACGAAACTTGGACAAGTTGATGATTTCTTTCAACACAGCTTTGCAGAGAAAG
TTGAATCCTCTGTTCAAGGTTTCCAGTATTGTTCCTCTCCCTTTACTTCCAAGAACAGCA
ACAAATAAAGTTATGAGAAGGGTATTGAGGCAACAGTTTTCTCAAGCAGAGCAAGGTTCC
AAACTGTGA

Peptide Sequence

PEP ID

XP_016450831.1
PEP Infomation

PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X3 [Nicotiana tabacum]
Sequence

MNISFSVPPECILRESPSHPGGQWLPGARVNPAKNCLSFRKRTLSDVAIVWRSEGNDEAP
VEKMTLKELCESVWAVAYALETLGLEKGSAIAIDMPMDVNSVVIYLAIVLAGYVVVSIAD
SFAPSEISTRLILSKAKAIFTQDFIFRGDKKIPLYSRVVDARSPTAIVIPNRASSLSIQL
RDGDISWPDFLERVKDSRGLEFVAVEQPITAFTNILFSSGTTGEPKAIPWSLLSPFKSAA
DGWCHMDIKKGDVVAWPTNLGWMMGPWLVYASLLNGASIALYNGSPLGSGFAKFVQDAKV
TMLGVIPSIVRTWKAKNSPDGFDWSTIRFFGSTGEASSVDEYLWLMGRAEYKPIIEYCGG
TEIGGSFVSGSLLQPQSLAAFSTAVMGCSLHILGDDGLPIPSDVPGTGELALGPLMFGAS
STLLNADHNEIYFKGMPVLNGKVLRRHGDVFERTSKGYYHAHGRADDTMNLGGIKVSSLE
IERICNAADENILETAAVGVPPTGGGPEKLVIAVVFKDSDNLERNLDKLMISFNTALQRK
LNPLFKVSSIVPLPLLPRTATNKVMRRVLRQQFSQAEQGSKL

Transcript Sequence

Gene sequence data has not been registered.